Tuesday, 20 September 2016

Methods for Identifying Differentially Expressed Genes: An Empirical Comparison

Microarray technology, which observes thousands of gene expressions at once, is one of the popular topics in recent decades. When it comes to the analysis of microarraydata to identify differentially expressed (DE) genes, many methods have been proposed and modified for improvement. 

Genes
However, the most popular methods such as Significance Analysis of Microarrays (SAM), samroc, fold change, and rank product are far from perfect. In order to determine which method is most powerful, it comes down to the characteristics of the sample and distribution of the gene expressions. The most practiced method is usually SAM or samroc butwhen the data tends to be skewed, the power of these methods decreases. With the concept that the median becomes a better measure of central tendency than the mean when the data is skewed, the test statistics of the SAM and fold change methods are modified in this paper. This study shows that the median modified fold change method improves the power for many cases when identifying DE genes if the data follows a lognormal distribution.

Monday, 19 September 2016

On De Broglie’s Double-particle Photon Hypothesis

De Broglie's Double-particle Photon Hypothesis
Establishment of an LC equation and of a local fields equation describing permanently localized photons from the analysis of kinetic energy circulation within the energy structure of the double-particle photon that Louis de Broglie hypothesized in the early 1930's. Among other interesting features, these equations provide a mechanical explanation to the localized photon properties of self-propelling at the speed of light and of self-guiding in straight line when no external interaction tends to deflect its trajectory. This paper summarizes the seminal considerations that led to the development of the 3-spaces model.

Friday, 16 September 2016

A Hierarchy of Symmetry Breaking in the Nonsymmetric Kaluza-Klein (Jordan-Thiry) Theory

Kaluza-Klein (Jordan-Thiry) Theory

The paper is devoted to the hierarchy of a symmetr y breaking in the Non symmetric Kaluza–Klein (Jordan–Thiry) Theory. The basic idea consists in a deformation of a vacuumstates manifold to the cartesian product of vacuum states manifolds of everystage of a symmetry breaking.In the paper we consider a pattern of a spontaneous symmetry breaking including a hierarchy in the Non symmetr ic Kaluza–Klein (Jordan–Thiry) Theory.

Thursday, 15 September 2016

Generalizing Two Structure Theorems of Lie Algebras to the Fuzzy Lie Algebras

Lie algebras were proposed by Sophus Lie and there are many applications of them in several branches of physics. The notion of fuzzy sets was introduced by Zadeh and manymathematicians have been involved in extending the concepts and results ofabstract Lie algebra to fuzzy theory. 

Lie Algebras
This paper is the continuation of the results obtained in, where we presented conditions to generalize the concepts of solvable and nilpotent radicals of Lie algebras (called of solvable and nilpotent fuzzy radicals, respectively) to a class of fuzzy Lie algebras. Inthis article we use the solvable fuzzy radical to generalize the structuretheorem of semisimple Lie algebras and the Levi’s decomposition theorem to aclass of the fuzzy Lie algebras. The results presented in this paper are still strongly connected with results proved in.

Wednesday, 14 September 2016

Sentiment Patterns

Even apart from the instability due to speculation, there is the instability due to the characteristic of human nature that a large proportion of our positive activities depend on spontaneous optimism rather than mathematical expectations, whether moral or hedonistic or economic. Most, probably, of our decisions to do something positive, the full consequences of which will be drawn out over many days to come, can only be taken as the result of animal spirits—a spontaneous urge to action rather than inaction, and not as the outcome of a weighted average of quantitative benefits multiplied by quantitative probabilities.

Sentiment Patterns
Human action is, in a great extent, predictable. Humans arerational and endowed with the ability to weigh benefits and costs in search forthe best possible expected outcome. Despite this straightforward evidence, in many circumstances involving decision-making there are evident departures relatively to the strict rational behavior. The complexity of the problems faced by individuals often compels them to adopt simple heuristics, to engage in strategic complementarities and to decide based on instincts or sentiments. 

Tuesday, 13 September 2016

The Traditional Ordinary Least Squares Estimator under Collinearity

In a multiple regression analysis, it is usually difficult to interpret the estimator of the individual coefficients if the explanatory variables are highly inter-correlated. Such aproblem is often referred to as the multicollinearity problem. There exist several ways to solve this problem. One such way is ridge regression. Two approaches of estimating the shrinkage ridge parameter k are proposed. 
Least Squares Estimator under Collinearity

Comparison is made with other ridge-type estimators. To investigate the performance of our proposed methods with the traditional ordinary least squares (OLS) and the other approaches for estimating the parameters of the ridge regression model, we calculate the mean squares error (MSE) using thesimulation techniques. Results of the simulation study shows that the suggested ridge regression outperforms both the OLS estimator and the other ridge-type estimators in all of the different situations evaluated in this paper.

Monday, 12 September 2016

How SI Units Hide the Equal Strength of Gravitation and Charge Fields

The use of SI units in their existing form hides that gravity is not the weakest force. The paper shows through symmetry arguments that Planck’s constant h and the Gravitational constant G are both dimensionless ratios when dimensional analysis is used at property levels deeper than mass, length and time. The resultant adjustments shown to be needed for SI unitsproduce much simpler sets of units which also solve the issue of why magneticfield H and magnetic inductance B have not previously had the same units. 
Gravitation and Charge Fields

The result shows that gravitational and charge fields have the same strengths when considered in fractional adjusted-Planck values. By showing that h and G are dimensionless, they can be understood to be unit-dependent ratios which can be eliminated from all equations by merging them within new adjusted SI units. Theimplications are that mass and charge sizes, and distance, are not theproperties which separate quantum and classical gravitational systems. The equivalence of gravitational and inertial mass is also shown. The new type of dimensional analysis shows how to uncover any law of nature or universal constant and that the current set of properties of nature is missing two from the set, whose dimensions and units can be inferred.